Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
HTTP42858 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.82■□□□□ 0.12
HTTP42858 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 PHBP10-201ENST00000416467 784 ntBASIC15.82■□□□□ 0.12
HTTP42858 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC15.82■□□□□ 0.12
HTTP42858 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HTTP42858 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
HTTP42858 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC15.82■□□□□ 0.12
HTTP42858 RN7SL480P-201ENST00000581481 294 ntBASIC15.82■□□□□ 0.12
HTTP42858 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC15.82■□□□□ 0.12
HTTP42858 Z82244.2-201ENST00000632196 448 ntBASIC15.82■□□□□ 0.12
HTTP42858 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HTTP42858 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HTTP42858 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HTTP42858 OR7E12P-201ENST00000344740 973 ntBASIC15.81■□□□□ 0.12
HTTP42858 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HTTP42858 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 AC006987.1-201ENST00000413610 527 ntBASIC15.81■□□□□ 0.12
HTTP42858 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.81■□□□□ 0.12
HTTP42858 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.81■□□□□ 0.12
HTTP42858 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 DNM1P46-202ENST00000415963 882 ntBASIC15.81■□□□□ 0.12
HTTP42858 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.81■□□□□ 0.12
HTTP42858 AC007679.1-201ENST00000458609 502 ntBASIC15.81■□□□□ 0.12
HTTP42858 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.81■□□□□ 0.12
HTTP42858 AC233724.9-201ENST00000511694 407 ntBASIC15.81■□□□□ 0.12
HTTP42858 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC15.81■□□□□ 0.12
HTTP42858 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 OR3A1-202ENST00000615105 966 ntBASIC15.81■□□□□ 0.12
HTTP42858 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 PPT1-215ENST00000641471 2368 ntBASIC15.81■□□□□ 0.12
HTTP42858 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.81■□□□□ 0.12
HTTP42858 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HTTP42858 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.81■□□□□ 0.12
HTTP42858 AL161932.2-201ENST00000435436 679 ntBASIC15.81■□□□□ 0.12
HTTP42858 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HTTP42858 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
HTTP42858 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC15.8■□□□□ 0.12
HTTP42858 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 CRIP1P2-201ENST00000425396 228 ntBASIC15.8■□□□□ 0.12
HTTP42858 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC15.8■□□□□ 0.12
HTTP42858 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC15.8■□□□□ 0.12
HTTP42858 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC15.8■□□□□ 0.12
HTTP42858 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC15.8■□□□□ 0.12
HTTP42858 FAM187B2P-201ENST00000577135 713 ntBASIC15.8■□□□□ 0.12
HTTP42858 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HTTP42858 RPS5-205ENST00000598495 800 ntTSL 3 BASIC15.8■□□□□ 0.12
HTTP42858 AC104506.1-201ENST00000609247 429 ntBASIC15.8■□□□□ 0.12
HTTP42858 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.8■□□□□ 0.12
HTTP42858 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 LINC00115-201ENST00000473798 1317 ntBASIC15.8■□□□□ 0.12
HTTP42858 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.8■□□□□ 0.12
HTTP42858 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HTTP42858 TPT1P9-201ENST00000413759 514 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms