Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.5■□□□□ 0.23
PRPHP41219 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.5■□□□□ 0.23
PRPHP41219 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.5■□□□□ 0.23
PRPHP41219 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRPHP41219 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.5■□□□□ 0.23
PRPHP41219 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.5■□□□□ 0.23
PRPHP41219 Z98259.2-201ENST00000641583 609 ntBASIC16.5■□□□□ 0.23
PRPHP41219 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.5■□□□□ 0.23
PRPHP41219 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.5■□□□□ 0.23
PRPHP41219 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.5■□□□□ 0.23
PRPHP41219 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPHP41219 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 AL008718.2-201ENST00000609206 1313 ntBASIC16.49■□□□□ 0.23
PRPHP41219 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRPHP41219 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 HSPB1P2-201ENST00000448722 546 ntBASIC16.49■□□□□ 0.23
PRPHP41219 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.49■□□□□ 0.23
PRPHP41219 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.49■□□□□ 0.23
PRPHP41219 AC239800.4-201ENST00000603712 296 ntBASIC16.49■□□□□ 0.23
PRPHP41219 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRPHP41219 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
PRPHP41219 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 REXO1L6P-201ENST00000603433 1515 ntBASIC16.49■□□□□ 0.23
PRPHP41219 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPHP41219 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.49■□□□□ 0.23
PRPHP41219 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PRPHP41219 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRPHP41219 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.48■□□□□ 0.23
PRPHP41219 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRPHP41219 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.48■□□□□ 0.23
PRPHP41219 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.48■□□□□ 0.23
PRPHP41219 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPHP41219 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms