Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL662890.1-201ENST00000396818 632 ntBASIC13.46□□□□□ -0.25
RFC3P40938 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.46□□□□□ -0.25
RFC3P40938 TLE1P1-201ENST00000422965 589 ntBASIC13.46□□□□□ -0.25
RFC3P40938 AC011742.3-201ENST00000439053 820 ntBASIC13.46□□□□□ -0.25
RFC3P40938 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.46□□□□□ -0.25
RFC3P40938 Z97180.1-201ENST00000445173 988 ntBASIC13.46□□□□□ -0.25
RFC3P40938 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.46□□□□□ -0.25
RFC3P40938 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.46□□□□□ -0.25
RFC3P40938 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 AL645939.5-201ENST00000606834 243 ntBASIC13.46□□□□□ -0.25
RFC3P40938 AC026740.1-201ENST00000607068 791 ntBASIC13.46□□□□□ -0.25
RFC3P40938 AC090164.2-201ENST00000611487 516 ntBASIC13.46□□□□□ -0.25
RFC3P40938 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
RFC3P40938 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
RFC3P40938 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RFC3P40938 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.46□□□□□ -0.26
RFC3P40938 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
RFC3P40938 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.46□□□□□ -0.26
RFC3P40938 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RFC3P40938 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.46□□□□□ -0.26
RFC3P40938 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.45□□□□□ -0.26
RFC3P40938 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.45□□□□□ -0.26
RFC3P40938 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 AC136759.1-202ENST00000530858 2194 ntBASIC13.45□□□□□ -0.26
RFC3P40938 AC006486.2-201ENST00000624246 2199 ntBASIC13.45□□□□□ -0.26
RFC3P40938 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 ZBED1P1-201ENST00000502364 1930 ntBASIC13.45□□□□□ -0.26
RFC3P40938 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.45□□□□□ -0.26
RFC3P40938 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RFC3P40938 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RFC3P40938 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.45□□□□□ -0.26
RFC3P40938 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 CICP12-201ENST00000455801 843 ntBASIC13.45□□□□□ -0.26
RFC3P40938 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.45□□□□□ -0.26
RFC3P40938 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.45□□□□□ -0.26
RFC3P40938 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.45□□□□□ -0.26
RFC3P40938 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RFC3P40938 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.45□□□□□ -0.26
RFC3P40938 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.45□□□□□ -0.26
RFC3P40938 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.45□□□□□ -0.26
RFC3P40938 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
RFC3P40938 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.45□□□□□ -0.26
RFC3P40938 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.45□□□□□ -0.26
RFC3P40938 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RFC3P40938 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.45□□□□□ -0.26
RFC3P40938 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 AC068587.8-201ENST00000641239 219 ntBASIC13.45□□□□□ -0.26
RFC3P40938 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.45□□□□□ -0.26
RFC3P40938 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.45□□□□□ -0.26
RFC3P40938 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.45□□□□□ -0.26
RFC3P40938 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RFC3P40938 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 AC097376.2-205ENST00000610159 5334 ntBASIC13.45□□□□□ -0.26
RFC3P40938 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RFC3P40938 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RFC3P40938 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms