Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
GDNFP39905 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 TOMM22P5-201ENST00000416399 439 ntBASIC12.83□□□□□ -0.36
GDNFP39905 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.83□□□□□ -0.36
GDNFP39905 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.83□□□□□ -0.36
GDNFP39905 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.83□□□□□ -0.36
GDNFP39905 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.83□□□□□ -0.36
GDNFP39905 AC104794.3-201ENST00000566840 1248 ntBASIC12.83□□□□□ -0.36
GDNFP39905 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
GDNFP39905 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.83□□□□□ -0.36
GDNFP39905 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 MEX3B-202ENST00000558133 4333 ntBASIC12.83□□□□□ -0.36
GDNFP39905 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
GDNFP39905 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.83□□□□□ -0.36
GDNFP39905 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.83□□□□□ -0.36
GDNFP39905 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.83□□□□□ -0.36
GDNFP39905 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GDNFP39905 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
GDNFP39905 AC090643.2-201ENST00000623442 2029 ntBASIC12.83□□□□□ -0.36
GDNFP39905 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.83□□□□□ -0.36
GDNFP39905 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
GDNFP39905 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.82□□□□□ -0.36
GDNFP39905 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GDNFP39905 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 AL118506.1-201ENST00000601296 3082 ntBASIC12.82□□□□□ -0.36
GDNFP39905 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.82□□□□□ -0.36
GDNFP39905 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GDNFP39905 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.82□□□□□ -0.36
GDNFP39905 AC092337.1-201ENST00000568699 1129 ntBASIC12.82□□□□□ -0.36
GDNFP39905 SRD5A3P1-201ENST00000603021 949 ntBASIC12.82□□□□□ -0.36
GDNFP39905 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC12.82□□□□□ -0.36
GDNFP39905 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GDNFP39905 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.82□□□□□ -0.36
GDNFP39905 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.82□□□□□ -0.36
GDNFP39905 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
GDNFP39905 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
GDNFP39905 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.82□□□□□ -0.36
GDNFP39905 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
GDNFP39905 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GDNFP39905 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms