Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.95□□□□□ -0.02
FDFT1P37268 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
FDFT1P37268 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.95□□□□□ -0.02
FDFT1P37268 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.95□□□□□ -0.02
FDFT1P37268 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.95□□□□□ -0.02
FDFT1P37268 BCRP2-202ENST00000447763 634 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 AL035414.1-201ENST00000451327 857 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 AL590640.2-201ENST00000457038 527 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.95□□□□□ -0.02
FDFT1P37268 TMEM198B-204ENST00000484016 896 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.95□□□□□ -0.02
FDFT1P37268 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.95□□□□□ -0.02
FDFT1P37268 BCRP6-201ENST00000510112 632 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 BCRP7-201ENST00000511549 544 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.95□□□□□ -0.02
FDFT1P37268 AP003171.2-201ENST00000528208 925 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.95□□□□□ -0.02
FDFT1P37268 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
FDFT1P37268 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 AC008825.2-201ENST00000603374 718 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.95□□□□□ -0.02
FDFT1P37268 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
FDFT1P37268 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 CICP16-201ENST00000502609 2813 ntBASIC14.95□□□□□ -0.02
FDFT1P37268 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FDFT1P37268 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
FDFT1P37268 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 AC064801.2-201ENST00000625052 1303 ntBASIC14.94□□□□□ -0.02
FDFT1P37268 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.94□□□□□ -0.02
FDFT1P37268 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.94□□□□□ -0.02
FDFT1P37268 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.94□□□□□ -0.02
FDFT1P37268 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 FAM197Y7-201ENST00000432892 766 ntBASIC14.94□□□□□ -0.02
FDFT1P37268 AC016694.1-201ENST00000434179 700 ntBASIC14.94□□□□□ -0.02
FDFT1P37268 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.94□□□□□ -0.02
FDFT1P37268 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.94□□□□□ -0.02
FDFT1P37268 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
FDFT1P37268 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.94□□□□□ -0.02
FDFT1P37268 AC008735.3-201ENST00000596646 500 ntBASIC14.94□□□□□ -0.02
FDFT1P37268 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 AC006453.4-201ENST00000636949 1252 ntBASIC14.94□□□□□ -0.02
FDFT1P37268 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.94□□□□□ -0.02
FDFT1P37268 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.94□□□□□ -0.02
FDFT1P37268 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.94□□□□□ -0.02
FDFT1P37268 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.94□□□□□ -0.02
FDFT1P37268 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.94□□□□□ -0.02
FDFT1P37268 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
FDFT1P37268 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.94□□□□□ -0.02
FDFT1P37268 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
FDFT1P37268 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms