Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RFC1P35251 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.46■□□□□ 0.07
RFC1P35251 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RFC1P35251 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 ANKRD19P-201ENST00000338192 862 ntBASIC15.46■□□□□ 0.07
RFC1P35251 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RFC1P35251 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.46■□□□□ 0.07
RFC1P35251 AL136309.1-201ENST00000403917 691 ntBASIC15.46■□□□□ 0.07
RFC1P35251 BOLA2P3-201ENST00000404566 256 ntBASIC15.46■□□□□ 0.07
RFC1P35251 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC1P35251 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.46■□□□□ 0.07
RFC1P35251 CHMP1AP1-201ENST00000445563 662 ntBASIC15.46■□□□□ 0.07
RFC1P35251 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.46■□□□□ 0.07
RFC1P35251 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 KLF2P4-201ENST00000451959 1225 ntBASIC15.46■□□□□ 0.07
RFC1P35251 RAB43P1-201ENST00000561790 589 ntBASIC15.46■□□□□ 0.07
RFC1P35251 PPY2P-201ENST00000582808 702 ntBASIC15.46■□□□□ 0.07
RFC1P35251 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 MIR6074-201ENST00000612054 107 ntBASIC15.46■□□□□ 0.07
RFC1P35251 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.46■□□□□ 0.07
RFC1P35251 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC1P35251 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC1P35251 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC1P35251 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.46■□□□□ 0.07
RFC1P35251 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC1P35251 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.46■□□□□ 0.07
RFC1P35251 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RFC1P35251 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.46■□□□□ 0.06
RFC1P35251 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RFC1P35251 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.46■□□□□ 0.06
RFC1P35251 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFC1P35251 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RFC1P35251 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.46■□□□□ 0.06
RFC1P35251 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFC1P35251 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RFC1P35251 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.45■□□□□ 0.06
RFC1P35251 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.45■□□□□ 0.06
RFC1P35251 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
RFC1P35251 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RFC1P35251 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFC1P35251 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFC1P35251 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.45■□□□□ 0.06
RFC1P35251 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RFC1P35251 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.45■□□□□ 0.06
RFC1P35251 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 CNN2P10-201ENST00000443067 918 ntBASIC15.45■□□□□ 0.06
RFC1P35251 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.45■□□□□ 0.06
RFC1P35251 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RFC1P35251 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 SNX29P1-201ENST00000548357 1007 ntBASIC15.45■□□□□ 0.06
RFC1P35251 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.45■□□□□ 0.06
RFC1P35251 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.45■□□□□ 0.06
RFC1P35251 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.45■□□□□ 0.06
RFC1P35251 ZACNP1-201ENST00000612259 710 ntBASIC15.45■□□□□ 0.06
RFC1P35251 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.45■□□□□ 0.06
RFC1P35251 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.45■□□□□ 0.06
RFC1P35251 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RFC1P35251 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RFC1P35251 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RFC1P35251 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.45■□□□□ 0.06
RFC1P35251 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RFC1P35251 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RFC1P35251 AC063926.2-201ENST00000623766 1308 ntBASIC15.44■□□□□ 0.06
RFC1P35251 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.44■□□□□ 0.06
RFC1P35251 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.44■□□□□ 0.06
RFC1P35251 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFC1P35251 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RFC1P35251 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.44■□□□□ 0.06
RFC1P35251 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.44■□□□□ 0.06
RFC1P35251 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFC1P35251 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RFC1P35251 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms