Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
PTPN6P29350 AC245100.3-201ENST00000441281 285 ntBASIC13.9□□□□□ -0.18
PTPN6P29350 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
PTPN6P29350 AC022210.1-201ENST00000449856 793 ntBASIC13.9□□□□□ -0.18
PTPN6P29350 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 FTH1P14-201ENST00000482930 551 ntBASIC13.9□□□□□ -0.18
PTPN6P29350 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.9□□□□□ -0.18
PTPN6P29350 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.9□□□□□ -0.18
PTPN6P29350 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PTPN6P29350 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.9□□□□□ -0.18
PTPN6P29350 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.9□□□□□ -0.18
PTPN6P29350 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 AC138466.3-201ENST00000619983 221 ntBASIC13.9□□□□□ -0.18
PTPN6P29350 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PTPN6P29350 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.9□□□□□ -0.18
PTPN6P29350 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.9□□□□□ -0.18
PTPN6P29350 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
PTPN6P29350 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
PTPN6P29350 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.9□□□□□ -0.18
PTPN6P29350 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.9□□□□□ -0.18
PTPN6P29350 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.9□□□□□ -0.18
PTPN6P29350 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.9□□□□□ -0.19
PTPN6P29350 PDIA3P1-201ENST00000471856 1510 ntBASIC13.9□□□□□ -0.19
PTPN6P29350 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.9□□□□□ -0.19
PTPN6P29350 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PTPN6P29350 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PTPN6P29350 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PTPN6P29350 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.89□□□□□ -0.19
PTPN6P29350 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.89□□□□□ -0.19
PTPN6P29350 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 AC016694.1-201ENST00000434179 700 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 AC007551.1-201ENST00000457394 519 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 AL391280.1-201ENST00000506969 1062 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.89□□□□□ -0.19
PTPN6P29350 SNX29P1-201ENST00000548357 1007 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.89□□□□□ -0.19
PTPN6P29350 AL359881.2-201ENST00000602973 570 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 MIR6805-201ENST00000615055 62 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 AC145423.3-201ENST00000615987 467 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PTPN6P29350 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PTPN6P29350 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.89□□□□□ -0.19
PTPN6P29350 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.89□□□□□ -0.19
PTPN6P29350 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PTPN6P29350 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
PTPN6P29350 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 AL157996.1-201ENST00000624684 2299 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 AC009093.2-202ENST00000620513 2079 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PTPN6P29350 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
PTPN6P29350 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms