Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.15□□□□□ -0.31
HLA-DOBP13765 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
HLA-DOBP13765 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
HLA-DOBP13765 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
HLA-DOBP13765 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 AC063926.2-201ENST00000623766 1308 ntBASIC13.14□□□□□ -0.31
HLA-DOBP13765 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.14□□□□□ -0.31
HLA-DOBP13765 BOLA2P3-201ENST00000404566 256 ntBASIC13.14□□□□□ -0.31
HLA-DOBP13765 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 CICP12-201ENST00000455801 843 ntBASIC13.14□□□□□ -0.31
HLA-DOBP13765 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 HILS1-202ENST00000545329 423 ntBASIC13.14□□□□□ -0.31
HLA-DOBP13765 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 ZACNP1-201ENST00000612259 710 ntBASIC13.14□□□□□ -0.31
HLA-DOBP13765 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 KRT8P28-201ENST00000433288 1390 ntBASIC13.14□□□□□ -0.31
HLA-DOBP13765 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.14□□□□□ -0.31
HLA-DOBP13765 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HLA-DOBP13765 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AC005840.4-201ENST00000541242 2494 ntBASIC13.13□□□□□ -0.31
HLA-DOBP13765 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 HIST2H2BB-201ENST00000449108 381 ntBASIC13.13□□□□□ -0.31
HLA-DOBP13765 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ACA64.2-201ENST00000459014 129 ntBASIC13.13□□□□□ -0.31
HLA-DOBP13765 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms