Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL4P13236 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL4P13236 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CCL4P13236 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL4P13236 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CCL4P13236 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL4P13236 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL4P13236 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL4P13236 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL4P13236 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCL4P13236 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL4P13236 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 MIR645-201ENST00000385283 94 ntBASIC13.67□□□□□ -0.22
CCL4P13236 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.67□□□□□ -0.22
CCL4P13236 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL4P13236 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 AC140658.4-201ENST00000561990 352 ntBASIC13.67□□□□□ -0.22
CCL4P13236 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL4P13236 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CCL4P13236 AC090386.2-201ENST00000623010 1039 ntBASIC13.67□□□□□ -0.22
CCL4P13236 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL4P13236 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCL4P13236 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 AC090502.4-201ENST00000551714 1386 ntBASIC13.67□□□□□ -0.22
CCL4P13236 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCL4P13236 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL4P13236 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCL4P13236 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL4P13236 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL4P13236 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCL4P13236 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL4P13236 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 AP002414.2-201ENST00000591780 3365 ntBASIC13.66□□□□□ -0.22
CCL4P13236 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL4P13236 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 GUSBP10-201ENST00000417412 665 ntBASIC13.66□□□□□ -0.22
CCL4P13236 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL4P13236 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.66□□□□□ -0.22
CCL4P13236 RNA5SP417-201ENST00000516459 108 ntBASIC13.66□□□□□ -0.22
CCL4P13236 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL4P13236 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL4P13236 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL4P13236 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.66□□□□□ -0.22
CCL4P13236 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCL4P13236 AC127024.7-201ENST00000625101 200 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms