Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 MAGEA5-201ENST00000446757 942 ntBASIC11.47□□□□□ -0.57
CD28P10747 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 ALG3P1-201ENST00000508806 1114 ntBASIC11.47□□□□□ -0.57
CD28P10747 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 AC131206.1-201ENST00000538078 1211 ntBASIC11.47□□□□□ -0.57
CD28P10747 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC11.47□□□□□ -0.57
CD28P10747 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.47□□□□□ -0.57
CD28P10747 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CD28P10747 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CD28P10747 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC11.47□□□□□ -0.57
CD28P10747 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.47□□□□□ -0.57
CD28P10747 BX088702.1-201ENST00000610784 235 ntBASIC11.47□□□□□ -0.57
CD28P10747 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 AP000346.4-201ENST00000614827 381 ntBASIC11.47□□□□□ -0.57
CD28P10747 AL353770.1-201ENST00000614915 403 ntBASIC11.47□□□□□ -0.57
CD28P10747 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.47□□□□□ -0.57
CD28P10747 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
CD28P10747 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
CD28P10747 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.47□□□□□ -0.57
CD28P10747 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CD28P10747 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CD28P10747 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CD28P10747 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CD28P10747 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.46□□□□□ -0.57
CD28P10747 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
CD28P10747 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 FXNP2-201ENST00000411625 547 ntBASIC11.46□□□□□ -0.57
CD28P10747 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CD28P10747 PDIA3P2-201ENST00000428073 158 ntBASIC11.46□□□□□ -0.57
CD28P10747 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC11.46□□□□□ -0.57
CD28P10747 AL157407.1-201ENST00000435784 904 ntBASIC11.46□□□□□ -0.57
CD28P10747 FTLP1-201ENST00000449155 526 ntBASIC11.46□□□□□ -0.57
CD28P10747 AC073150.1-201ENST00000450406 1084 ntBASIC11.46□□□□□ -0.57
CD28P10747 AL035414.1-201ENST00000451327 857 ntBASIC11.46□□□□□ -0.57
CD28P10747 AL353637.1-201ENST00000451571 732 ntBASIC11.46□□□□□ -0.57
CD28P10747 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 AC234782.1-201ENST00000451950 919 ntBASIC11.46□□□□□ -0.57
CD28P10747 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC11.46□□□□□ -0.57
CD28P10747 TMEM198B-204ENST00000484016 896 ntBASIC11.46□□□□□ -0.57
CD28P10747 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.46□□□□□ -0.57
CD28P10747 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC11.46□□□□□ -0.57
CD28P10747 AC116345.2-201ENST00000512837 523 ntBASIC11.46□□□□□ -0.57
CD28P10747 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
CD28P10747 FADS2-212ENST00000522639 360 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 PRKXP1-201ENST00000561423 1122 ntBASIC11.46□□□□□ -0.57
CD28P10747 AC103988.2-201ENST00000561804 725 ntBASIC11.46□□□□□ -0.57
CD28P10747 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11.46□□□□□ -0.57
CD28P10747 MIR4706-201ENST00000582134 82 ntBASIC11.46□□□□□ -0.57
CD28P10747 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 IRF3-215ENST00000596822 823 ntTSL 3 BASIC11.46□□□□□ -0.57
CD28P10747 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC11.46□□□□□ -0.57
CD28P10747 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.46□□□□□ -0.57
CD28P10747 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms