Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 FAM90A21P-201ENST00000510875 1396 ntBASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 FAM90A15P-201ENST00000514465 1395 ntBASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 FAM90A6P-201ENST00000515148 1394 ntBASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 FAM90A16P-201ENST00000526662 1395 ntBASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 FAM90A9P-201ENST00000527940 1395 ntBASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 FAM90A5P-201ENST00000528738 1395 ntBASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 FAM90A14P-201ENST00000530386 1395 ntBASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 FAM90A13P-201ENST00000534703 1395 ntBASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 AC063926.3-201ENST00000624734 5658 ntBASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.17■□□□□ 0.66
CSB-PGBD3P0DP91 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 KRT17P4-201ENST00000429445 819 ntBASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 AC098934.1-203ENST00000442868 1262 ntBASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 AC090386.2-201ENST00000623010 1039 ntBASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 CTBP2P8-201ENST00000422584 1330 ntBASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSB-PGBD3P0DP91 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 PPIA-210ENST00000620047 827 ntTSL 5 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC19.15■□□□□ 0.66
CSB-PGBD3P0DP91 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSB-PGBD3P0DP91 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.14■□□□□ 0.66
CSB-PGBD3P0DP91 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSB-PGBD3P0DP91 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSB-PGBD3P0DP91 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.14■□□□□ 0.66
CSB-PGBD3P0DP91 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSB-PGBD3P0DP91 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CSB-PGBD3P0DP91 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CSB-PGBD3P0DP91 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms