Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.26□□□□□ -0.29
FREM3P0C091 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.26□□□□□ -0.29
FREM3P0C091 NUP210P1-202ENST00000504322 710 ntBASIC13.26□□□□□ -0.29
FREM3P0C091 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.26□□□□□ -0.29
FREM3P0C091 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.26□□□□□ -0.29
FREM3P0C091 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.26□□□□□ -0.29
FREM3P0C091 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.26□□□□□ -0.29
FREM3P0C091 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
FREM3P0C091 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.26□□□□□ -0.29
FREM3P0C091 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
FREM3P0C091 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
FREM3P0C091 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.25□□□□□ -0.29
FREM3P0C091 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM3P0C091 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM3P0C091 AL645933.1-201ENST00000440087 609 ntBASIC13.25□□□□□ -0.29
FREM3P0C091 RPL18P13-201ENST00000478088 569 ntBASIC13.25□□□□□ -0.29
FREM3P0C091 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.25□□□□□ -0.29
FREM3P0C091 AP001258.2-201ENST00000529891 490 ntBASIC13.25□□□□□ -0.29
FREM3P0C091 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
FREM3P0C091 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.25□□□□□ -0.29
FREM3P0C091 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
FREM3P0C091 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
FREM3P0C091 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 AL136172.1-201ENST00000598590 1394 ntBASIC13.25□□□□□ -0.29
FREM3P0C091 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM3P0C091 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
FREM3P0C091 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM3P0C091 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
FREM3P0C091 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 AC144522.1-201ENST00000625111 1658 ntBASIC13.25□□□□□ -0.29
FREM3P0C091 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
FREM3P0C091 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM3P0C091 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM3P0C091 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM3P0C091 BX284668.4-201ENST00000453917 508 ntBASIC13.25□□□□□ -0.29
FREM3P0C091 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.25□□□□□ -0.29
FREM3P0C091 TPT1P11-201ENST00000458482 498 ntBASIC13.25□□□□□ -0.29
FREM3P0C091 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.25□□□□□ -0.29
FREM3P0C091 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM3P0C091 AP001505.2-201ENST00000616815 443 ntBASIC13.25□□□□□ -0.29
FREM3P0C091 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.25□□□□□ -0.29
FREM3P0C091 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.25□□□□□ -0.29
FREM3P0C091 AC004923.1-202ENST00000642106 209 ntBASIC13.25□□□□□ -0.29
FREM3P0C091 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.25□□□□□ -0.29
FREM3P0C091 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
FREM3P0C091 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM3P0C091 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.24□□□□□ -0.29
FREM3P0C091 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms