Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLTAP09496 AC126335.2-201ENST00000623362 4637 ntBASIC16.05■□□□□ 0.16
CLTAP09496 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
CLTAP09496 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.05■□□□□ 0.16
CLTAP09496 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CLTAP09496 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.05■□□□□ 0.16
CLTAP09496 KRT8P29-201ENST00000420409 1371 ntBASIC16.05■□□□□ 0.16
CLTAP09496 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.05■□□□□ 0.16
CLTAP09496 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.05■□□□□ 0.16
CLTAP09496 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.05■□□□□ 0.16
CLTAP09496 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 TUBB8P8-201ENST00000458717 1058 ntBASIC16.05■□□□□ 0.16
CLTAP09496 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 AC021723.1-201ENST00000486306 515 ntBASIC16.05■□□□□ 0.16
CLTAP09496 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 AC126915.1-201ENST00000522847 1038 ntBASIC16.05■□□□□ 0.16
CLTAP09496 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.05■□□□□ 0.16
CLTAP09496 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.05■□□□□ 0.16
CLTAP09496 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.05■□□□□ 0.16
CLTAP09496 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 AC243960.2-201ENST00000600996 747 ntBASIC16.05■□□□□ 0.16
CLTAP09496 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.05■□□□□ 0.16
CLTAP09496 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.05■□□□□ 0.16
CLTAP09496 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.05■□□□□ 0.16
CLTAP09496 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
CLTAP09496 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.05■□□□□ 0.16
CLTAP09496 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLTAP09496 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.05■□□□□ 0.16
CLTAP09496 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CLTAP09496 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLTAP09496 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLTAP09496 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLTAP09496 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLTAP09496 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.04■□□□□ 0.16
CLTAP09496 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLTAP09496 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLTAP09496 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.04■□□□□ 0.16
CLTAP09496 AC020907.1-201ENST00000616460 1350 ntBASIC16.04■□□□□ 0.16
CLTAP09496 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLTAP09496 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.04■□□□□ 0.16
CLTAP09496 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.04■□□□□ 0.16
CLTAP09496 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.04■□□□□ 0.16
CLTAP09496 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.04■□□□□ 0.16
CLTAP09496 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.04■□□□□ 0.16
CLTAP09496 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CLTAP09496 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.04■□□□□ 0.16
CLTAP09496 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLTAP09496 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CLTAP09496 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.04■□□□□ 0.16
CLTAP09496 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLTAP09496 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CLTAP09496 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLTAP09496 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.03■□□□□ 0.16
CLTAP09496 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
CLTAP09496 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms