Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM3P06753 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM3P06753 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM3P06753 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.48■□□□□ 0.23
TPM3P06753 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.48■□□□□ 0.23
TPM3P06753 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.48■□□□□ 0.23
TPM3P06753 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM3P06753 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TPM3P06753 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.48■□□□□ 0.23
TPM3P06753 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM3P06753 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM3P06753 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TPM3P06753 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM3P06753 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM3P06753 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM3P06753 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM3P06753 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM3P06753 REXO1L1P-201ENST00000379010 6598 ntBASIC16.48■□□□□ 0.23
TPM3P06753 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM3P06753 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 KRT8P14-201ENST00000414254 1442 ntBASIC16.47■□□□□ 0.23
TPM3P06753 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TPM3P06753 AP002761.4-201ENST00000565433 3361 ntBASIC16.47■□□□□ 0.23
TPM3P06753 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 KHSRPP1-201ENST00000427983 1768 ntBASIC16.47■□□□□ 0.23
TPM3P06753 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 CNN2P2-201ENST00000443536 909 ntBASIC16.47■□□□□ 0.23
TPM3P06753 CNN2P3-201ENST00000450201 906 ntBASIC16.47■□□□□ 0.23
TPM3P06753 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.47■□□□□ 0.23
TPM3P06753 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
TPM3P06753 MEIS3P1-201ENST00000495167 958 ntBASIC16.47■□□□□ 0.23
TPM3P06753 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TPM3P06753 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.47■□□□□ 0.23
TPM3P06753 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM3P06753 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 AC044860.1-202ENST00000559481 777 ntBASIC16.47■□□□□ 0.23
TPM3P06753 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM3P06753 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 AL136317.3-201ENST00000618497 906 ntBASIC16.47■□□□□ 0.23
TPM3P06753 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM3P06753 NCLP1-201ENST00000445357 1963 ntBASIC16.47■□□□□ 0.23
TPM3P06753 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.47■□□□□ 0.23
TPM3P06753 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TPM3P06753 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM3P06753 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TPM3P06753 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.47■□□□□ 0.23
TPM3P06753 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TPM3P06753 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TPM3P06753 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TPM3P06753 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.46■□□□□ 0.23
TPM3P06753 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC16.46■□□□□ 0.23
TPM3P06753 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms