Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CD74P04233 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.33□□□□□ -0.44
CD74P04233 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.33□□□□□ -0.44
CD74P04233 AC114501.2-201ENST00000439631 535 ntBASIC12.33□□□□□ -0.44
CD74P04233 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.33□□□□□ -0.44
CD74P04233 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.33□□□□□ -0.44
CD74P04233 AC023141.5-201ENST00000458585 616 ntBASIC12.33□□□□□ -0.44
CD74P04233 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.33□□□□□ -0.44
CD74P04233 GIMAP3P-201ENST00000495150 836 ntBASIC12.33□□□□□ -0.44
CD74P04233 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.33□□□□□ -0.44
CD74P04233 PGAM5P1-201ENST00000518923 814 ntBASIC12.33□□□□□ -0.44
CD74P04233 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.33□□□□□ -0.44
CD74P04233 AC092865.5-201ENST00000545435 363 ntBASIC12.33□□□□□ -0.44
CD74P04233 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.33□□□□□ -0.44
CD74P04233 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 AL590440.2-201ENST00000641973 1595 ntBASIC12.33□□□□□ -0.44
CD74P04233 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 AL022313.4-201ENST00000562756 2046 ntBASIC12.33□□□□□ -0.44
CD74P04233 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
CD74P04233 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.33□□□□□ -0.44
CD74P04233 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CD74P04233 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CD74P04233 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.33□□□□□ -0.44
CD74P04233 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.33□□□□□ -0.44
CD74P04233 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CD74P04233 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CD74P04233 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.32□□□□□ -0.44
CD74P04233 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CD74P04233 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.32□□□□□ -0.44
CD74P04233 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.32□□□□□ -0.44
CD74P04233 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.32□□□□□ -0.44
CD74P04233 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.32□□□□□ -0.44
CD74P04233 YBX1P5-201ENST00000509441 847 ntBASIC12.32□□□□□ -0.44
CD74P04233 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.32□□□□□ -0.44
CD74P04233 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
CD74P04233 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
CD74P04233 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 AC005829.1-201ENST00000570002 483 ntBASIC12.32□□□□□ -0.44
CD74P04233 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.32□□□□□ -0.44
CD74P04233 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 AL049840.4-201ENST00000602422 811 ntBASIC12.32□□□□□ -0.44
CD74P04233 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 AL662799.1-202ENST00000614205 422 ntBASIC12.32□□□□□ -0.44
CD74P04233 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.32□□□□□ -0.44
CD74P04233 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
CD74P04233 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD74P04233 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.32□□□□□ -0.44
CD74P04233 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms