Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CBX6O95503 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CBX6O95503 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CBX6O95503 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CBX6O95503 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.69□□□□□ -0.06
CBX6O95503 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CBX6O95503 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.69□□□□□ -0.06
CBX6O95503 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 SERBP1P3-201ENST00000459980 809 ntBASIC14.69□□□□□ -0.06
CBX6O95503 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.69□□□□□ -0.06
CBX6O95503 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CBX6O95503 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
CBX6O95503 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.69□□□□□ -0.06
CBX6O95503 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.69□□□□□ -0.06
CBX6O95503 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.69□□□□□ -0.06
CBX6O95503 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.69□□□□□ -0.06
CBX6O95503 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.69□□□□□ -0.06
CBX6O95503 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.69□□□□□ -0.06
CBX6O95503 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.69□□□□□ -0.06
CBX6O95503 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CBX6O95503 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CBX6O95503 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CBX6O95503 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 AL157414.3-201ENST00000624276 1954 ntBASIC14.68□□□□□ -0.06
CBX6O95503 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CBX6O95503 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CBX6O95503 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.68□□□□□ -0.06
CBX6O95503 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.68□□□□□ -0.06
CBX6O95503 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CBX6O95503 TPRX2P-201ENST00000535362 881 ntBASIC14.68□□□□□ -0.06
CBX6O95503 AP005482.1-201ENST00000563722 1273 ntBASIC14.68□□□□□ -0.06
CBX6O95503 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.68□□□□□ -0.06
CBX6O95503 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.68□□□□□ -0.06
CBX6O95503 CTBP2P3-201ENST00000585629 1255 ntBASIC14.68□□□□□ -0.06
CBX6O95503 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.68□□□□□ -0.06
CBX6O95503 AC099568.2-201ENST00000609194 695 ntBASIC14.68□□□□□ -0.06
CBX6O95503 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.68□□□□□ -0.06
CBX6O95503 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.68□□□□□ -0.06
CBX6O95503 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CBX6O95503 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CBX6O95503 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CBX6O95503 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.68□□□□□ -0.06
CBX6O95503 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CBX6O95503 BEND3P3-201ENST00000611030 2440 ntBASIC14.67□□□□□ -0.06
CBX6O95503 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CBX6O95503 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms