Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AC099063.4-201ENST00000641099 1602 ntBASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NPIPA2E9PIF3 AC015656.1-201ENST00000624209 3578 ntBASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 AL008707.1-201ENST00000422498 534 ntBASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 AL133466.1-201ENST00000447582 150 ntBASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 AC013355.1-201ENST00000562625 723 ntBASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 AC009955.4-201ENST00000597192 544 ntBASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 CU633904.3-201ENST00000624042 1029 ntBASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 AC138627.1-207ENST00000641560 1006 ntBASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 TUBBP5-203ENST00000508529 1334 ntBASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NPIPA2E9PIF3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AC003102.2-201ENST00000589195 1469 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AC106881.1-201ENST00000605849 3329 ntBASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NPIPA2E9PIF3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms