Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 MRPL37P1-201ENST00000592451 1337 ntBASIC12.57□□□□□ -0.4
TMEM235A6NFC5 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TMEM235A6NFC5 AC114271.1-201ENST00000612689 2813 ntBASIC12.57□□□□□ -0.4
TMEM235A6NFC5 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.56□□□□□ -0.4
TMEM235A6NFC5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 CNN2P2-201ENST00000443536 909 ntBASIC12.56□□□□□ -0.4
TMEM235A6NFC5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 CNN2P3-201ENST00000450201 906 ntBASIC12.56□□□□□ -0.4
TMEM235A6NFC5 AL589987.1-201ENST00000453380 819 ntBASIC12.56□□□□□ -0.4
TMEM235A6NFC5 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.56□□□□□ -0.4
TMEM235A6NFC5 AC022616.1-201ENST00000518688 554 ntBASIC12.56□□□□□ -0.4
TMEM235A6NFC5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 AL136317.3-201ENST00000618497 906 ntBASIC12.56□□□□□ -0.4
TMEM235A6NFC5 Z92544.3-201ENST00000624747 417 ntBASIC12.56□□□□□ -0.4
TMEM235A6NFC5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM235A6NFC5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 AC211486.1-202ENST00000416371 468 ntBASIC12.55□□□□□ -0.4
TMEM235A6NFC5 CNN2P11-201ENST00000429351 262 ntBASIC12.55□□□□□ -0.4
TMEM235A6NFC5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 AC112482.1-201ENST00000492080 688 ntBASIC12.55□□□□□ -0.4
TMEM235A6NFC5 AC211476.1-201ENST00000503899 468 ntBASIC12.55□□□□□ -0.4
TMEM235A6NFC5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.55□□□□□ -0.4
TMEM235A6NFC5 AC027612.4-201ENST00000605371 583 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms