Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 AL138799.1-201ENST00000448213 1675 ntBASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RIMS3Q9UJD0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 AL645937.2-201ENST00000396808 931 ntBASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 FAM86LP-201ENST00000478302 853 ntBASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 SPDYE18-201ENST00000510091 1050 ntBASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 AC135586.1-201ENST00000539323 574 ntBASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 DUX4L27-201ENST00000554796 1261 ntBASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 AP001160.2-201ENST00000596071 487 ntBASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 POM121L14P-201ENST00000406100 1558 ntBASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 AC125807.2-201ENST00000513358 3514 ntBASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 CICP1-201ENST00000416803 2410 ntBASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RIMS3Q9UJD0 TUBB8P4-201ENST00000511806 1324 ntBASIC13.9□□□□□ -0.19
RIMS3Q9UJD0 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
RIMS3Q9UJD0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 AC026410.3-201ENST00000514280 936 ntBASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 AC107373.2-201ENST00000607735 490 ntBASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 AC004840.1-201ENST00000636359 365 ntBASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 AL031719.1-201ENST00000623365 2587 ntBASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RIMS3Q9UJD0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms