Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 MIR7704-201ENST00000610524 59 ntBASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 EPM2A-214ENST00000638783 801 ntTSL 5 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC22.06■■□□□ 1.12
RIMBP3Q9UFD9 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 AL139384.1-201ENST00000612143 3047 ntBASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 RPL13AP5-201ENST00000439189 612 ntBASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 AC009238.3-201ENST00000512705 217 ntBASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 AC104759.1-201ENST00000559109 939 ntBASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 KRT18P8-201ENST00000581937 1246 ntBASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC22.05■■□□□ 1.12
RIMBP3Q9UFD9 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 RN7SL134P-201ENST00000579756 303 ntBASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 MIR4526-201ENST00000583168 87 ntBASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RIMBP3Q9UFD9 AC092364.2-201ENST00000596710 2692 ntBASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 AC104212.2-201ENST00000478813 628 ntBASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 AC098591.1-202ENST00000507914 937 ntBASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 AL603832.2-201ENST00000566195 2125 ntBASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RIMBP3Q9UFD9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 SDCBP2P1-201ENST00000416115 614 ntBASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 AC017081.1-201ENST00000420063 823 ntBASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 AL355075.5-201ENST00000553568 890 ntBASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC22.02■■□□□ 1.12
RIMBP3Q9UFD9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms