Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 AC092053.3-201ENST00000641308 4975 ntBASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
THUMPD1Q9NXG2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.83□□□□□ -0.19
THUMPD1Q9NXG2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.83□□□□□ -0.19
THUMPD1Q9NXG2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
THUMPD1Q9NXG2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
THUMPD1Q9NXG2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
THUMPD1Q9NXG2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 AC139712.1-201ENST00000378256 1875 ntBASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 RN7SKP230-201ENST00000365642 335 ntBASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 MIR770-201ENST00000390219 98 ntBASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 FTLP10-202ENST00000505798 471 ntBASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 AC103988.2-201ENST00000561804 725 ntBASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 CHCHD2P3-201ENST00000603038 451 ntBASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 PPT1-213ENST00000641319 2388 ntBASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
THUMPD1Q9NXG2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 CICP20-201ENST00000443330 2801 ntBASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 AL359183.1-201ENST00000623796 2132 ntBASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 UGT1A2P-201ENST00000454886 866 ntBASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 AC140912.1-201ENST00000577171 1054 ntBASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
THUMPD1Q9NXG2 ENPP7P14-201ENST00000621765 1040 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms