Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.91■□□□□ 0.14
TRMT13Q9NUP7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRMT13Q9NUP7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRMT13Q9NUP7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRMT13Q9NUP7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRMT13Q9NUP7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 OR5BD1P-201ENST00000532527 817 ntBASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 AC068867.1-201ENST00000559855 150 ntBASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 LINC00528-201ENST00000600723 2160 ntBASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 PPT1-215ENST00000641471 2368 ntBASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRMT13Q9NUP7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 RN7SL357P-201ENST00000581065 298 ntBASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 AC007250.1-201ENST00000608934 338 ntBASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 TEKT4P2-202ENST00000559466 1312 ntBASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRMT13Q9NUP7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 AC132872.4-202ENST00000622924 2756 ntBASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRMT13Q9NUP7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms