Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CFAP52-201ENST00000352665 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 RHD-201ENST00000328664 2930 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 KIR2DL4-205ENST00000396284 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 AC026369.1-202ENST00000508953 4913 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 TCN2-201ENST00000215838 2535 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 ACAN-208ENST00000561243 7593 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 FSCN1P1-201ENST00000568912 1481 ntBASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 DACH2-202ENST00000373131 2418 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 HNRNPH2-201ENST00000316594 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 KRT18P29-201ENST00000397031 1267 ntBASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 ABHD17AP4-201ENST00000411545 909 ntBASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 TERF1P5-201ENST00000477545 1207 ntBASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 KIRREL3-201ENST00000525144 3808 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 STK25P1-201ENST00000585406 838 ntBASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 AC106739.1-201ENST00000617035 715 ntBASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 N6AMT1-202ENST00000351429 4781 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 PHB-210ENST00000511832 1509 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 CYP2B6-201ENST00000324071 3054 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 FAR1-201ENST00000354817 5264 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 PTPRR-201ENST00000283228 3529 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
CDC42SE1Q9NRR8 SALL4P5-201ENST00000419001 1760 ntBASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 RANBP3-202ENST00000340578 3233 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ACSM2B-202ENST00000414188 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ERVMER34-1-201ENST00000440542 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 CCDC120-207ENST00000606812 3857 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 MIEF1-203ENST00000404569 3797 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 TOP3BP1-201ENST00000420768 1380 ntBASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDC42SE1Q9NRR8 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms