Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.52■□□□□ 0.4
UPF3BQ9BZI7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.52■□□□□ 0.39
UPF3BQ9BZI7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 TPM3P8-201ENST00000330554 643 ntBASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 AC092933.1-201ENST00000393644 945 ntBASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 AL355864.2-201ENST00000447420 863 ntBASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 INE1-201ENST00000456273 945 ntBASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 BX088702.1-201ENST00000610784 235 ntBASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UPF3BQ9BZI7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 SLC25A47P1-201ENST00000531577 414 ntBASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 KRT17P8-201ENST00000540749 863 ntBASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 AC132938.2-201ENST00000579188 680 ntBASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 MIR4683-201ENST00000579659 81 ntBASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms