Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC026271.4-201ENST00000578214 1833 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC104581.1-202ENST00000635932 2618 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC069224.1-201ENST00000566372 1715 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 RNFT1P3-201ENST00000340898 1052 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC092447.1-201ENST00000341855 964 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 MED8-202ENST00000372455 1186 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 TRBV3-1-201ENST00000390387 391 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 GUSBP5-201ENST00000418136 578 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC009226.1-203ENST00000418850 741 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC018866.1-202ENST00000421820 470 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC104843.2-201ENST00000427666 297 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 XBP1P1-201ENST00000436573 652 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 SDCBPP1-201ENST00000440192 890 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AL035252.1-201ENST00000440642 895 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC244505.5-201ENST00000443639 207 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 OR11G1P-201ENST00000557042 968 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC010531.3-201ENST00000569147 513 ntTSL 4 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC091147.1-201ENST00000583290 510 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 MTCO2P22-201ENST00000603246 681 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC024085.1-201ENST00000604299 432 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC234791.1-201ENST00000620830 1203 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 AC090950.2-201ENST00000624280 660 ntBASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 LINC00969-266ENST00000626156 683 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 EIF3L-201ENST00000381683 1599 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 PDK3-202ENST00000441463 1921 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-2Q9BYR7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
KRTAP3-2Q9BYR7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms