Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 CNN2P8-201ENST00000421872 913 ntBASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AC026954.1-201ENST00000429771 1293 ntBASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 TPT1P11-201ENST00000458482 498 ntBASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AC008687.7-202ENST00000637404 953 ntBASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 AC055811.4-201ENST00000624039 1754 ntBASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 DUX4L45-201ENST00000566406 1057 ntBASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 BX539320.1-201ENST00000623759 877 ntBASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 AC004241.5-201ENST00000623870 2448 ntBASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF4Q9BUZ4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAF4Q9BUZ4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms