Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 AL354702.1-201ENST00000442006 1960 ntBASIC13.45□□□□□ -0.26
SNX18Q96RF0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 KRT8P22-201ENST00000562317 1415 ntBASIC13.45□□□□□ -0.26
SNX18Q96RF0 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 SLC7A15P-201ENST00000424028 1363 ntBASIC13.45□□□□□ -0.26
SNX18Q96RF0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNX18Q96RF0 AL391825.1-201ENST00000457671 1364 ntBASIC13.45□□□□□ -0.26
SNX18Q96RF0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNX18Q96RF0 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AP001267.2-201ENST00000532619 2086 ntBASIC13.44□□□□□ -0.26
SNX18Q96RF0 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AC020658.7-201ENST00000624274 2442 ntBASIC13.44□□□□□ -0.26
SNX18Q96RF0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 OR8S1-201ENST00000310194 1080 ntBASIC13.44□□□□□ -0.26
SNX18Q96RF0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 DGCR5-201ENST00000399539 862 ntBASIC13.44□□□□□ -0.26
SNX18Q96RF0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AP006294.1-201ENST00000415407 339 ntBASIC13.44□□□□□ -0.26
SNX18Q96RF0 TLE1P1-201ENST00000422965 589 ntBASIC13.44□□□□□ -0.26
SNX18Q96RF0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AC022447.6-201ENST00000515522 438 ntBASIC13.44□□□□□ -0.26
SNX18Q96RF0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNX18Q96RF0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.44□□□□□ -0.26
SNX18Q96RF0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms