Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-CQ95604 AC067931.2-201ENST00000623655 2003 ntBASIC14.88□□□□□ -0.03
HLA-CQ95604 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-CQ95604 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-CQ95604 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-CQ95604 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-CQ95604 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 Z97985.1-201ENST00000332270 946 ntBASIC14.88□□□□□ -0.03
HLA-CQ95604 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-CQ95604 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HLA-CQ95604 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-CQ95604 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-CQ95604 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HLA-CQ95604 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-CQ95604 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-CQ95604 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.88□□□□□ -0.03
HLA-CQ95604 AP000920.1-201ENST00000531824 344 ntBASIC14.88□□□□□ -0.03
HLA-CQ95604 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.88□□□□□ -0.03
HLA-CQ95604 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-CQ95604 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.88□□□□□ -0.03
HLA-CQ95604 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HLA-CQ95604 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-CQ95604 AL512324.3-201ENST00000619383 882 ntBASIC14.88□□□□□ -0.03
HLA-CQ95604 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-CQ95604 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-CQ95604 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-CQ95604 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-CQ95604 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-CQ95604 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-CQ95604 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-CQ95604 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-CQ95604 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-CQ95604 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-CQ95604 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-CQ95604 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 SIRPB3P-201ENST00000340424 1216 ntBASIC14.87□□□□□ -0.03
HLA-CQ95604 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HLA-CQ95604 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HLA-CQ95604 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HLA-CQ95604 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.87□□□□□ -0.03
HLA-CQ95604 BAK1P2-201ENST00000532665 631 ntBASIC14.87□□□□□ -0.03
HLA-CQ95604 AL132994.1-201ENST00000554098 400 ntBASIC14.87□□□□□ -0.03
HLA-CQ95604 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-CQ95604 RN7SL524P-201ENST00000581152 300 ntBASIC14.87□□□□□ -0.03
HLA-CQ95604 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 CSTP2-201ENST00000610599 398 ntBASIC14.87□□□□□ -0.03
HLA-CQ95604 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.87□□□□□ -0.03
HLA-CQ95604 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-CQ95604 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-CQ95604 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HLA-CQ95604 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-CQ95604 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-CQ95604 AC024909.3-201ENST00000611513 2257 ntBASIC14.87□□□□□ -0.03
HLA-CQ95604 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-CQ95604 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-CQ95604 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-CQ95604 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-CQ95604 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-CQ95604 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-CQ95604 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HLA-CQ95604 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-CQ95604 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-CQ95604 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HLA-CQ95604 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms