Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 GOLGA2P7-209ENST00000560408 745 ntBASIC17.4■□□□□ 0.38
SNED1Q8TER0 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 AP005264.5-201ENST00000590066 467 ntBASIC17.4■□□□□ 0.38
SNED1Q8TER0 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 AC144831.1-201ENST00000573312 2656 ntBASIC17.4■□□□□ 0.38
SNED1Q8TER0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 AL109809.1-201ENST00000418979 1367 ntBASIC17.4■□□□□ 0.38
SNED1Q8TER0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SNED1Q8TER0 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SNED1Q8TER0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SNED1Q8TER0 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNED1Q8TER0 AC092573.1-201ENST00000433054 884 ntBASIC17.39■□□□□ 0.38
SNED1Q8TER0 HLA-DPA2-205ENST00000433582 733 ntBASIC17.39■□□□□ 0.38
SNED1Q8TER0 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.39■□□□□ 0.38
SNED1Q8TER0 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.39■□□□□ 0.38
SNED1Q8TER0 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.39■□□□□ 0.38
SNED1Q8TER0 AC005586.2-201ENST00000563946 837 ntBASIC17.39■□□□□ 0.38
SNED1Q8TER0 RN7SL455P-201ENST00000580629 282 ntBASIC17.39■□□□□ 0.38
SNED1Q8TER0 RN7SL556P-201ENST00000582856 298 ntBASIC17.39■□□□□ 0.38
SNED1Q8TER0 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.39■□□□□ 0.38
SNED1Q8TER0 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC17.39■□□□□ 0.38
SNED1Q8TER0 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.39■□□□□ 0.38
SNED1Q8TER0 AP000769.1-203ENST00000637245 208 ntBASIC17.39■□□□□ 0.38
SNED1Q8TER0 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.39■□□□□ 0.38
SNED1Q8TER0 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SNED1Q8TER0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNED1Q8TER0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.39■□□□□ 0.37
SNED1Q8TER0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNED1Q8TER0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.39■□□□□ 0.37
SNED1Q8TER0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 AC117503.4-201ENST00000623229 1418 ntBASIC17.39■□□□□ 0.37
SNED1Q8TER0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.39■□□□□ 0.37
SNED1Q8TER0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SNED1Q8TER0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNED1Q8TER0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNED1Q8TER0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNED1Q8TER0 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC106827.1-201ENST00000366454 431 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 AL929302.1-201ENST00000426556 871 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 MME-218ENST00000625667 363 ntTSL 5 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 PDXDC2P-206ENST00000534700 1315 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 AC064801.2-201ENST00000625052 1303 ntBASIC17.38■□□□□ 0.37
SNED1Q8TER0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SNED1Q8TER0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNED1Q8TER0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms