Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 RPL29P2-202ENST00000498671 657 ntBASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 MT3-202ENST00000561640 514 ntTSL 3 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 RPS5-205ENST00000598495 800 ntTSL 3 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 AC068760.1-201ENST00000493579 1953 ntBASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 MIR632-201ENST00000385193 94 ntBASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 CDKN2A-AS1-201ENST00000441769 823 ntBASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 AC134878.2-201ENST00000620700 1265 ntBASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 RPL18AP15-201ENST00000430258 517 ntBASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 RN7SL76P-201ENST00000482435 289 ntBASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.48□□□□□ -0.89
ALMS1Q8TCU4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 UGT1A12P-201ENST00000447084 853 ntBASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 PSME2P2-201ENST00000453033 700 ntBASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 BAK1P2-201ENST00000532665 631 ntBASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 AC132825.4-202ENST00000578792 434 ntBASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 RN7SL478P-201ENST00000584358 298 ntBASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
ALMS1Q8TCU4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
ALMS1Q8TCU4 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC9.46□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms