Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 E2F3P2-201ENST00000447755 1422 ntBASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 RNA5SP412-201ENST00000516234 123 ntBASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 AC079316.1-201ENST00000548397 411 ntBASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 AC023310.1-201ENST00000554836 735 ntBASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 MIR4525-201ENST00000580000 75 ntBASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 MIR4783-201ENST00000580343 82 ntBASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 MIR4538-201ENST00000581377 78 ntBASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 AC064801.2-201ENST00000625052 1303 ntBASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH19Q8TAB3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 OR2I1P-209ENST00000641730 5365 ntBASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 BRWD1P1-201ENST00000401091 371 ntBASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 MIR1908-201ENST00000410394 80 ntBASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AL161932.2-201ENST00000435436 679 ntBASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 ACTBP11-201ENST00000436287 1126 ntBASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 YBX1P6-201ENST00000442962 1002 ntBASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AC100850.1-201ENST00000506768 649 ntBASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDH19Q8TAB3 TCAM1P-207ENST00000485295 1537 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms