Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DNAAF1Q8NEP3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 AL591122.2-201ENST00000624125 1853 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 BASP1P1-201ENST00000430708 665 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 TMEM198B-204ENST00000484016 896 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 AC104794.3-201ENST00000566840 1248 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 BRI3BPP1-201ENST00000594224 787 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 AC139530.3-201ENST00000620344 690 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 AL603764.1-201ENST00000636452 321 ntBASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DNAAF1Q8NEP3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 AC020910.6-201ENST00000623084 1459 ntBASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 RN7SL832P-201ENST00000607781 1756 ntBASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 FAM90A12P-201ENST00000519497 2375 ntBASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 FAM90A24P-201ENST00000520792 2369 ntBASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
DNAAF1Q8NEP3 VDAC1P7-201ENST00000462417 847 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms