Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PCDHA1-201ENST00000378133 2726 ntBASIC17.97■□□□□ 0.47
COL23A1Q86Y22 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.97■□□□□ 0.47
COL23A1Q86Y22 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 AC073869.4-201ENST00000620841 800 ntBASIC17.97■□□□□ 0.47
COL23A1Q86Y22 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 AL391005.1-201ENST00000623953 2435 ntBASIC17.96■□□□□ 0.47
COL23A1Q86Y22 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 KRT18P62-201ENST00000446618 1287 ntBASIC17.96■□□□□ 0.47
COL23A1Q86Y22 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 TYMSP2-201ENST00000589501 424 ntBASIC17.96■□□□□ 0.47
COL23A1Q86Y22 AC006116.2-201ENST00000589958 988 ntBASIC17.96■□□□□ 0.47
COL23A1Q86Y22 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL23A1Q86Y22 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
COL23A1Q86Y22 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
COL23A1Q86Y22 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 MIR2278-201ENST00000516344 96 ntBASIC17.95■□□□□ 0.46
COL23A1Q86Y22 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL23A1Q86Y22 AC078814.4-201ENST00000546650 327 ntBASIC17.95■□□□□ 0.46
COL23A1Q86Y22 AC091304.3-201ENST00000566500 716 ntBASIC17.95■□□□□ 0.46
COL23A1Q86Y22 ANKRD26P1-203ENST00000569528 966 ntBASIC17.95■□□□□ 0.46
COL23A1Q86Y22 RN7SL602P-201ENST00000578326 324 ntBASIC17.95■□□□□ 0.46
COL23A1Q86Y22 MIR4254-201ENST00000581063 76 ntBASIC17.95■□□□□ 0.46
COL23A1Q86Y22 RN7SL718P-201ENST00000581254 303 ntBASIC17.95■□□□□ 0.46
COL23A1Q86Y22 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.95■□□□□ 0.46
COL23A1Q86Y22 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms