Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 AL031719.1-201ENST00000623365 2587 ntBASIC11.11□□□□□ -0.63
MRPL54Q6P161 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 AC008267.7-201ENST00000624570 1194 ntBASIC11.11□□□□□ -0.63
MRPL54Q6P161 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 MYADML-201ENST00000474610 2147 ntBASIC11.11□□□□□ -0.63
MRPL54Q6P161 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
MRPL54Q6P161 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL54Q6P161 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 BCAR1-209ENST00000546196 1340 ntBASIC11.1□□□□□ -0.63
MRPL54Q6P161 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL54Q6P161 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 AC005014.1-201ENST00000432006 2976 ntBASIC11.1□□□□□ -0.63
MRPL54Q6P161 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 AC092910.1-201ENST00000482027 1129 ntBASIC11.1□□□□□ -0.63
MRPL54Q6P161 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 UNC93B6-202ENST00000528242 690 ntBASIC11.1□□□□□ -0.63
MRPL54Q6P161 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
MRPL54Q6P161 AC135782.3-201ENST00000562782 2105 ntBASIC11.1□□□□□ -0.63
MRPL54Q6P161 AC087388.1-201ENST00000571370 1112 ntBASIC11.1□□□□□ -0.63
MRPL54Q6P161 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms