Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 AC135586.1-201ENST00000539323 574 ntBASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 AL118506.1-201ENST00000601296 3082 ntBASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 MIR6799-201ENST00000620297 69 ntBASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 AC025048.6-201ENST00000634326 1161 ntBASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HMBOX1Q6NT76 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 RN7SL692P-201ENST00000464677 288 ntBASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 AL596325.1-201ENST00000563991 1082 ntBASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 AC000095.1-201ENST00000603208 874 ntBASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.93□□□□□ -0.18
HMBOX1Q6NT76 NCLP1-201ENST00000445357 1963 ntBASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 AP002761.4-201ENST00000565433 3361 ntBASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms