Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 AHCYP2-201ENST00000430630 1300 ntBASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HERC4Q5GLZ8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 RN7SL713P-201ENST00000582127 302 ntBASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 AC073413.1-201ENST00000603927 732 ntBASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 AC002472.3-201ENST00000640124 621 ntBASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HERC4Q5GLZ8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 MYADML-201ENST00000474610 2147 ntBASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 ALG3P1-201ENST00000508806 1114 ntBASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 AP006547.1-201ENST00000563435 692 ntBASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HERC4Q5GLZ8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AC006504.5-208ENST00000588784 2401 ntBASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 LINC01230-201ENST00000625222 3017 ntBASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HERC4Q5GLZ8 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms