Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC091046.1-201ENST00000331871 207 ntBASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 BNIP3P13-201ENST00000599968 566 ntBASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC144BQ3MJ40 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AC011474.4-201ENST00000623523 2076 ntBASIC17■□□□□ 0.31
CCDC144BQ3MJ40 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 CICP20-201ENST00000443330 2801 ntBASIC17■□□□□ 0.31
CCDC144BQ3MJ40 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 HLA-DQB2-229ENST00000411527 1059 ntBASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AC013355.1-201ENST00000562625 723 ntBASIC17■□□□□ 0.31
CCDC144BQ3MJ40 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AL358472.3-201ENST00000608147 415 ntBASIC17■□□□□ 0.31
CCDC144BQ3MJ40 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17■□□□□ 0.31
CCDC144BQ3MJ40 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC004899.1-201ENST00000424687 1714 ntBASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC011742.3-201ENST00000439053 820 ntBASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC104073.2-201ENST00000453737 312 ntBASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 AC106794.1-201ENST00000506935 792 ntBASIC16.99■□□□□ 0.31
CCDC144BQ3MJ40 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms