Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 AC103810.3-201ENST00000583567 96 ntBASIC18.68■□□□□ 0.58
TWISTNBQ3B726 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 AL157813.1-201ENST00000612996 587 ntBASIC18.68■□□□□ 0.58
TWISTNBQ3B726 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TWISTNBQ3B726 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 AC011742.3-201ENST00000439053 820 ntBASIC18.67■□□□□ 0.58
TWISTNBQ3B726 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 ACTG1P17-201ENST00000558391 1119 ntBASIC18.67■□□□□ 0.58
TWISTNBQ3B726 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 DRG2-220ENST00000583355 891 ntTSL 3 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 AL805961.1-203ENST00000641078 1258 ntBASIC18.67■□□□□ 0.58
TWISTNBQ3B726 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TWISTNBQ3B726 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 RN7SKP214-201ENST00000364208 315 ntBASIC18.66■□□□□ 0.58
TWISTNBQ3B726 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.66■□□□□ 0.58
TWISTNBQ3B726 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 CALR4P-201ENST00000431943 946 ntBASIC18.66■□□□□ 0.58
TWISTNBQ3B726 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 NDUFV2P1-201ENST00000596415 907 ntBASIC18.66■□□□□ 0.58
TWISTNBQ3B726 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TWISTNBQ3B726 HSPA8P5-201ENST00000456928 2069 ntBASIC18.65■□□□□ 0.58
TWISTNBQ3B726 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC18.65■□□□□ 0.58
TWISTNBQ3B726 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TWISTNBQ3B726 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TWISTNBQ3B726 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.65■□□□□ 0.58
TWISTNBQ3B726 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWISTNBQ3B726 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWISTNBQ3B726 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
TWISTNBQ3B726 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TWISTNBQ3B726 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms