Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.46□□□□□ -0.09
CDKL1Q00532 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.46□□□□□ -0.09
CDKL1Q00532 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.46□□□□□ -0.09
CDKL1Q00532 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.46□□□□□ -0.09
CDKL1Q00532 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.46□□□□□ -0.09
CDKL1Q00532 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDKL1Q00532 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
CDKL1Q00532 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDKL1Q00532 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 NUTM2HP-201ENST00000442076 2498 ntBASIC14.46□□□□□ -0.09
CDKL1Q00532 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.46□□□□□ -0.09
CDKL1Q00532 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.46□□□□□ -0.09
CDKL1Q00532 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.46□□□□□ -0.09
CDKL1Q00532 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.46□□□□□ -0.09
CDKL1Q00532 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.46□□□□□ -0.09
CDKL1Q00532 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.46□□□□□ -0.09
CDKL1Q00532 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.46□□□□□ -0.09
CDKL1Q00532 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.46□□□□□ -0.09
CDKL1Q00532 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.46□□□□□ -0.09
CDKL1Q00532 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CDKL1Q00532 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDKL1Q00532 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.46□□□□□ -0.09
CDKL1Q00532 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.46□□□□□ -0.09
CDKL1Q00532 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CDKL1Q00532 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDKL1Q00532 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDKL1Q00532 INE2-201ENST00000630399 1874 ntBASIC14.46□□□□□ -0.1
CDKL1Q00532 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDKL1Q00532 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDKL1Q00532 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.46□□□□□ -0.1
CDKL1Q00532 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDKL1Q00532 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDKL1Q00532 AC090505.1-201ENST00000430515 1834 ntBASIC14.45□□□□□ -0.1
CDKL1Q00532 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.45□□□□□ -0.1
CDKL1Q00532 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDKL1Q00532 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CDKL1Q00532 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
CDKL1Q00532 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 AC139712.1-201ENST00000378256 1875 ntBASIC14.45□□□□□ -0.1
CDKL1Q00532 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 COX5BP8-201ENST00000416911 349 ntBASIC14.45□□□□□ -0.1
CDKL1Q00532 CNN2P8-201ENST00000421872 913 ntBASIC14.45□□□□□ -0.1
CDKL1Q00532 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 AC016694.1-201ENST00000434179 700 ntBASIC14.45□□□□□ -0.1
CDKL1Q00532 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.45□□□□□ -0.1
CDKL1Q00532 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.45□□□□□ -0.1
CDKL1Q00532 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.45□□□□□ -0.1
CDKL1Q00532 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.45□□□□□ -0.1
CDKL1Q00532 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.45□□□□□ -0.1
CDKL1Q00532 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.45□□□□□ -0.1
CDKL1Q00532 AC020910.5-201ENST00000623668 1865 ntBASIC14.45□□□□□ -0.1
CDKL1Q00532 AL590440.2-201ENST00000641973 1595 ntBASIC14.45□□□□□ -0.1
CDKL1Q00532 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDKL1Q00532 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDKL1Q00532 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms