Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.02□□□□□ -0.32
NKX6-1P78426 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NKX6-1P78426 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NKX6-1P78426 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 AC253536.4-201ENST00000440539 267 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 CNN2P10-201ENST00000443067 918 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 LDHBP1-201ENST00000455730 1119 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 RPS2P36-201ENST00000456516 831 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 IMP3P2-201ENST00000489760 475 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 AC026434.2-201ENST00000506094 1078 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.02□□□□□ -0.33
NKX6-1P78426 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NKX6-1P78426 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.02□□□□□ -0.33
NKX6-1P78426 AC138649.2-201ENST00000615886 705 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 AC091812.3-201ENST00000621362 345 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 AL353726.2-201ENST00000623259 884 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 AC128714.1-201ENST00000637035 887 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.02□□□□□ -0.33
NKX6-1P78426 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 LILRP1-201ENST00000444199 1370 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
NKX6-1P78426 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 AC018735.1-201ENST00000437208 1502 ntBASIC13.02□□□□□ -0.33
NKX6-1P78426 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
NKX6-1P78426 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NKX6-1P78426 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-1P78426 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NKX6-1P78426 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-1P78426 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX6-1P78426 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NKX6-1P78426 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX6-1P78426 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
NKX6-1P78426 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-1P78426 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
NKX6-1P78426 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX6-1P78426 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NKX6-1P78426 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.01□□□□□ -0.33
NKX6-1P78426 CYP46A4P-201ENST00000414953 267 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 Z97180.1-201ENST00000445173 988 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 MAGEA5-201ENST00000446757 942 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 HSPB1P2-201ENST00000448722 546 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 RN7SL720P-201ENST00000488178 304 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.01□□□□□ -0.33
NKX6-1P78426 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
NKX6-1P78426 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.01□□□□□ -0.33
NKX6-1P78426 CHMP4BP1-201ENST00000556017 588 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.01□□□□□ -0.33
NKX6-1P78426 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.01□□□□□ -0.33
NKX6-1P78426 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 AC007663.3-201ENST00000609632 465 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.01□□□□□ -0.33
NKX6-1P78426 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-1P78426 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms