Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.86□□□□□ -0.19
RAE1P78406 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RAE1P78406 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.86□□□□□ -0.19
RAE1P78406 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.86□□□□□ -0.19
RAE1P78406 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAE1P78406 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RAE1P78406 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RAE1P78406 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
RAE1P78406 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 AC079776.1-201ENST00000401540 1152 ntBASIC13.85□□□□□ -0.19
RAE1P78406 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 AC112492.5-201ENST00000421897 457 ntBASIC13.85□□□□□ -0.19
RAE1P78406 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 AL157407.1-201ENST00000435784 904 ntBASIC13.85□□□□□ -0.19
RAE1P78406 CTBP2P5-201ENST00000454986 1264 ntBASIC13.85□□□□□ -0.19
RAE1P78406 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.85□□□□□ -0.19
RAE1P78406 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 DUX4L46-201ENST00000566845 751 ntBASIC13.85□□□□□ -0.19
RAE1P78406 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.85□□□□□ -0.19
RAE1P78406 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 AL512343.1-201ENST00000605837 169 ntBASIC13.85□□□□□ -0.19
RAE1P78406 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 AGAP10P-201ENST00000454844 2418 ntBASIC13.85□□□□□ -0.19
RAE1P78406 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.85□□□□□ -0.19
RAE1P78406 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.85□□□□□ -0.19
RAE1P78406 AC130686.1-201ENST00000622936 2466 ntBASIC13.85□□□□□ -0.19
RAE1P78406 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAE1P78406 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.84□□□□□ -0.19
RAE1P78406 KLF2P4-201ENST00000451959 1225 ntBASIC13.84□□□□□ -0.19
RAE1P78406 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.84□□□□□ -0.19
RAE1P78406 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 KRT17P8-201ENST00000540749 863 ntBASIC13.84□□□□□ -0.19
RAE1P78406 SNX29P1-201ENST00000548357 1007 ntBASIC13.84□□□□□ -0.19
RAE1P78406 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.84□□□□□ -0.19
RAE1P78406 AC009955.4-201ENST00000597192 544 ntBASIC13.84□□□□□ -0.19
RAE1P78406 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 AL162274.1-201ENST00000617191 1098 ntBASIC13.84□□□□□ -0.19
RAE1P78406 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms