Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL645937.2-201ENST00000396808 931 ntBASIC12.67□□□□□ -0.38
ACTBP60709 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.67□□□□□ -0.38
ACTBP60709 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.67□□□□□ -0.38
ACTBP60709 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.67□□□□□ -0.38
ACTBP60709 AC097493.3-201ENST00000509725 367 ntBASIC12.67□□□□□ -0.38
ACTBP60709 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 DUX4L27-201ENST00000554796 1261 ntBASIC12.67□□□□□ -0.38
ACTBP60709 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.67□□□□□ -0.38
ACTBP60709 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.67□□□□□ -0.38
ACTBP60709 AC106028.4-201ENST00000614509 607 ntBASIC12.67□□□□□ -0.38
ACTBP60709 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
ACTBP60709 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.67□□□□□ -0.38
ACTBP60709 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.67□□□□□ -0.38
ACTBP60709 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.67□□□□□ -0.38
ACTBP60709 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.67□□□□□ -0.38
ACTBP60709 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 AC068760.1-201ENST00000493579 1953 ntBASIC12.67□□□□□ -0.38
ACTBP60709 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.67□□□□□ -0.38
ACTBP60709 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACTBP60709 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
ACTBP60709 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
ACTBP60709 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
ACTBP60709 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 KRT8P35-201ENST00000483942 1338 ntBASIC12.66□□□□□ -0.38
ACTBP60709 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ACTBP60709 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.66□□□□□ -0.38
ACTBP60709 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.66□□□□□ -0.38
ACTBP60709 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ACTBP60709 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ACTBP60709 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ACTBP60709 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.66□□□□□ -0.38
ACTBP60709 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.66□□□□□ -0.38
ACTBP60709 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.66□□□□□ -0.38
ACTBP60709 HLA-K-203ENST00000430151 1046 ntBASIC12.66□□□□□ -0.38
ACTBP60709 AC092580.3-201ENST00000430932 139 ntBASIC12.66□□□□□ -0.38
ACTBP60709 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.66□□□□□ -0.38
ACTBP60709 AC092183.1-201ENST00000469884 875 ntBASIC12.66□□□□□ -0.38
ACTBP60709 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.66□□□□□ -0.38
ACTBP60709 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.66□□□□□ -0.38
ACTBP60709 AL512361.1-201ENST00000554200 418 ntBASIC12.66□□□□□ -0.38
ACTBP60709 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.66□□□□□ -0.38
ACTBP60709 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.66□□□□□ -0.38
ACTBP60709 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.66□□□□□ -0.38
ACTBP60709 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ACTBP60709 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.66□□□□□ -0.38
ACTBP60709 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms