Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.8□□□□□ -0.04
WNT3AP56704 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.8□□□□□ -0.04
WNT3AP56704 DUX4L45-201ENST00000566406 1057 ntBASIC14.8□□□□□ -0.04
WNT3AP56704 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.8□□□□□ -0.04
WNT3AP56704 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
WNT3AP56704 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.8□□□□□ -0.04
WNT3AP56704 AC009955.4-201ENST00000597192 544 ntBASIC14.8□□□□□ -0.04
WNT3AP56704 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.8□□□□□ -0.04
WNT3AP56704 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.8□□□□□ -0.04
WNT3AP56704 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.8□□□□□ -0.04
WNT3AP56704 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
WNT3AP56704 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
WNT3AP56704 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
WNT3AP56704 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.8□□□□□ -0.04
WNT3AP56704 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 AC016397.2-201ENST00000624848 1985 ntBASIC14.8□□□□□ -0.04
WNT3AP56704 HSPA8P5-201ENST00000456928 2069 ntBASIC14.8□□□□□ -0.04
WNT3AP56704 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
WNT3AP56704 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.8□□□□□ -0.04
WNT3AP56704 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
WNT3AP56704 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
WNT3AP56704 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.79□□□□□ -0.04
WNT3AP56704 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 OR8S1-201ENST00000310194 1080 ntBASIC14.79□□□□□ -0.04
WNT3AP56704 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 GRK6P1-201ENST00000400595 1711 ntBASIC14.79□□□□□ -0.04
WNT3AP56704 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
WNT3AP56704 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.79□□□□□ -0.04
WNT3AP56704 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.79□□□□□ -0.04
WNT3AP56704 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.79□□□□□ -0.04
WNT3AP56704 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.79□□□□□ -0.04
WNT3AP56704 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.79□□□□□ -0.04
WNT3AP56704 MIR4783-201ENST00000580343 82 ntBASIC14.79□□□□□ -0.04
WNT3AP56704 EEF1DP1-201ENST00000585891 896 ntBASIC14.79□□□□□ -0.04
WNT3AP56704 AC239800.4-201ENST00000603712 296 ntBASIC14.79□□□□□ -0.04
WNT3AP56704 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.79□□□□□ -0.04
WNT3AP56704 AC244157.2-201ENST00000616239 1006 ntBASIC14.79□□□□□ -0.04
WNT3AP56704 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 AL928921.2-201ENST00000641325 2442 ntBASIC14.79□□□□□ -0.04
WNT3AP56704 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
WNT3AP56704 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
WNT3AP56704 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
WNT3AP56704 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
WNT3AP56704 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.78□□□□□ -0.04
WNT3AP56704 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
WNT3AP56704 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
WNT3AP56704 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
WNT3AP56704 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
WNT3AP56704 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms