Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LHX2P50458 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
LHX2P50458 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 AL161932.2-201ENST00000435436 679 ntBASIC13.02□□□□□ -0.33
LHX2P50458 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.02□□□□□ -0.33
LHX2P50458 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.02□□□□□ -0.33
LHX2P50458 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.02□□□□□ -0.33
LHX2P50458 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 NUP210P1-202ENST00000504322 710 ntBASIC13.02□□□□□ -0.33
LHX2P50458 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.02□□□□□ -0.33
LHX2P50458 MIR3188-201ENST00000583494 85 ntBASIC13.02□□□□□ -0.33
LHX2P50458 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 AL606495.2-201ENST00000605867 535 ntBASIC13.02□□□□□ -0.33
LHX2P50458 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.02□□□□□ -0.33
LHX2P50458 AC140479.7-201ENST00000636301 2332 ntBASIC13.02□□□□□ -0.33
LHX2P50458 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.33
LHX2P50458 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LHX2P50458 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LHX2P50458 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LHX2P50458 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LHX2P50458 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.01□□□□□ -0.33
LHX2P50458 INTS4P1-203ENST00000641008 3683 ntBASIC13.01□□□□□ -0.33
LHX2P50458 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LHX2P50458 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
LHX2P50458 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.01□□□□□ -0.33
LHX2P50458 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.01□□□□□ -0.33
LHX2P50458 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 TSPY25P-201ENST00000429463 745 ntBASIC13.01□□□□□ -0.33
LHX2P50458 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.01□□□□□ -0.33
LHX2P50458 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.01□□□□□ -0.33
LHX2P50458 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
LHX2P50458 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.01□□□□□ -0.33
LHX2P50458 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.01□□□□□ -0.33
LHX2P50458 AC064801.2-201ENST00000625052 1303 ntBASIC13.01□□□□□ -0.33
LHX2P50458 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LHX2P50458 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 LINC01165-201ENST00000445190 1623 ntBASIC13.01□□□□□ -0.33
LHX2P50458 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 AP001267.2-201ENST00000532619 2086 ntBASIC13.01□□□□□ -0.33
LHX2P50458 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LHX2P50458 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LHX2P50458 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LHX2P50458 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LHX2P50458 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
LHX2P50458 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13□□□□□ -0.33
LHX2P50458 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13□□□□□ -0.33
LHX2P50458 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LHX2P50458 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
LHX2P50458 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms