Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
UBE2AP49459 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 AL157414.3-201ENST00000624276 1954 ntBASIC9.38□□□□□ -0.91
UBE2AP49459 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC9.38□□□□□ -0.91
UBE2AP49459 AL353779.1-201ENST00000434793 351 ntBASIC9.38□□□□□ -0.91
UBE2AP49459 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 GNAQP1-201ENST00000444815 1067 ntBASIC9.38□□□□□ -0.91
UBE2AP49459 CYMP-203ENST00000474680 1263 ntBASIC9.38□□□□□ -0.91
UBE2AP49459 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC9.38□□□□□ -0.91
UBE2AP49459 AC026410.3-201ENST00000514280 936 ntBASIC9.38□□□□□ -0.91
UBE2AP49459 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC9.38□□□□□ -0.91
UBE2AP49459 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC9.38□□□□□ -0.91
UBE2AP49459 AC120045.2-201ENST00000567334 178 ntBASIC9.38□□□□□ -0.91
UBE2AP49459 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC9.38□□□□□ -0.91
UBE2AP49459 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC9.38□□□□□ -0.91
UBE2AP49459 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC9.38□□□□□ -0.91
UBE2AP49459 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 AC118758.2-201ENST00000614242 2813 ntBASIC9.38□□□□□ -0.91
UBE2AP49459 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 ABR-228ENST00000574437 3196 ntTSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE2AP49459 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
UBE2AP49459 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC9.38□□□□□ -0.91
UBE2AP49459 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms