Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TM4SF4P48230 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TM4SF4P48230 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.23■□□□□ 0.19
TM4SF4P48230 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TM4SF4P48230 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM4SF4P48230 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TM4SF4P48230 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC16.23■□□□□ 0.19
TM4SF4P48230 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.23■□□□□ 0.19
TM4SF4P48230 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.23■□□□□ 0.19
TM4SF4P48230 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TM4SF4P48230 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.22■□□□□ 0.19
TM4SF4P48230 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 AIG1-203ENST00000367596 559 ntTSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.22■□□□□ 0.19
TM4SF4P48230 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 CDK4P1-201ENST00000454213 828 ntBASIC16.22■□□□□ 0.19
TM4SF4P48230 AP000533.1-201ENST00000456143 1177 ntBASIC16.22■□□□□ 0.19
TM4SF4P48230 TPT1P6-201ENST00000458298 514 ntBASIC16.22■□□□□ 0.19
TM4SF4P48230 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 AC004923.3-201ENST00000527532 355 ntBASIC16.22■□□□□ 0.19
TM4SF4P48230 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC16.22■□□□□ 0.19
TM4SF4P48230 AC020922.4-201ENST00000621389 339 ntBASIC16.22■□□□□ 0.19
TM4SF4P48230 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TM4SF4P48230 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
TM4SF4P48230 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.22■□□□□ 0.19
TM4SF4P48230 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TM4SF4P48230 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.22■□□□□ 0.19
TM4SF4P48230 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.22■□□□□ 0.19
TM4SF4P48230 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TM4SF4P48230 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
TM4SF4P48230 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TM4SF4P48230 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TM4SF4P48230 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.21■□□□□ 0.19
TM4SF4P48230 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.21■□□□□ 0.19
TM4SF4P48230 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TM4SF4P48230 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TM4SF4P48230 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 AC092115.1-201ENST00000566277 1402 ntBASIC16.21■□□□□ 0.19
TM4SF4P48230 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TM4SF4P48230 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TM4SF4P48230 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.21■□□□□ 0.19
TM4SF4P48230 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC16.21■□□□□ 0.19
TM4SF4P48230 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC16.21■□□□□ 0.19
TM4SF4P48230 MIR611-201ENST00000384869 67 ntBASIC16.21■□□□□ 0.19
TM4SF4P48230 CASP2-203ENST00000392925 616 ntTSL 3 BASIC16.21■□□□□ 0.19
TM4SF4P48230 DKKL1P1-201ENST00000400550 698 ntBASIC16.21■□□□□ 0.19
TM4SF4P48230 RPL10-203ENST00000406022 748 ntTSL 3 BASIC16.21■□□□□ 0.19
TM4SF4P48230 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC16.21■□□□□ 0.19
TM4SF4P48230 TREX1-203ENST00000456089 629 ntTSL 3 BASIC16.21■□□□□ 0.19
TM4SF4P48230 RNU1-80P-201ENST00000459500 161 ntBASIC16.21■□□□□ 0.19
TM4SF4P48230 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.21■□□□□ 0.19
TM4SF4P48230 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC16.21■□□□□ 0.19
TM4SF4P48230 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.21■□□□□ 0.19
TM4SF4P48230 KRT8P34-201ENST00000577607 1044 ntBASIC16.21■□□□□ 0.19
TM4SF4P48230 AC254633.1-201ENST00000606790 345 ntBASIC16.21■□□□□ 0.19
TM4SF4P48230 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC16.21■□□□□ 0.19
TM4SF4P48230 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC16.21■□□□□ 0.19
TM4SF4P48230 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TM4SF4P48230 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.21■□□□□ 0.19
TM4SF4P48230 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.21■□□□□ 0.19
TM4SF4P48230 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC16.21■□□□□ 0.19
TM4SF4P48230 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
TM4SF4P48230 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.21■□□□□ 0.19
TM4SF4P48230 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TM4SF4P48230 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TM4SF4P48230 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TM4SF4P48230 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.21■□□□□ 0.18
TM4SF4P48230 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TM4SF4P48230 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms