Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KDM5CP41229 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 SIRPB3P-201ENST00000340424 1216 ntBASIC21.25■□□□□ 0.99
KDM5CP41229 CDCA4P4-201ENST00000435216 680 ntBASIC21.25■□□□□ 0.99
KDM5CP41229 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC21.25■□□□□ 0.99
KDM5CP41229 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC21.25■□□□□ 0.99
KDM5CP41229 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM5CP41229 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM5CP41229 AC092612.1-201ENST00000514501 998 ntBASIC21.25■□□□□ 0.99
KDM5CP41229 PMEL-214ENST00000550447 901 ntTSL 3 BASIC21.25■□□□□ 0.99
KDM5CP41229 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM5CP41229 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM5CP41229 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
KDM5CP41229 AL031673.1-201ENST00000611460 466 ntBASIC21.25■□□□□ 0.99
KDM5CP41229 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KDM5CP41229 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
KDM5CP41229 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDM5CP41229 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
KDM5CP41229 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.24■□□□□ 0.99
KDM5CP41229 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM5CP41229 POR-201ENST00000394893 2532 ntTSL 5 BASIC21.24■□□□□ 0.99
KDM5CP41229 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 WASH7P-201ENST00000488147 1351 ntBASIC21.24■□□□□ 0.99
KDM5CP41229 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC21.24■□□□□ 0.99
KDM5CP41229 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC21.24■□□□□ 0.99
KDM5CP41229 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
KDM5CP41229 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM5CP41229 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM5CP41229 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
KDM5CP41229 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM5CP41229 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDM5CP41229 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM5CP41229 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC21.23■□□□□ 0.99
KDM5CP41229 SHMT1P1-201ENST00000419974 1312 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC21.23■□□□□ 0.99
KDM5CP41229 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC21.23■□□□□ 0.99
KDM5CP41229 AP000244.1-201ENST00000424582 201 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 VENTXP4-201ENST00000449029 958 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 HNRNPA1P42-201ENST00000458678 957 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC21.23■□□□□ 0.99
KDM5CP41229 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC21.23■□□□□ 0.99
KDM5CP41229 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM5CP41229 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC21.23■□□□□ 0.99
KDM5CP41229 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM5CP41229 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC21.23■□□□□ 0.99
KDM5CP41229 MIR4746-201ENST00000579802 71 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 AC005777.1-201ENST00000588332 187 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 URAHP-205ENST00000610227 398 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 CR392039.1-201ENST00000623217 204 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM5CP41229 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
KDM5CP41229 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
KDM5CP41229 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM5CP41229 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
KDM5CP41229 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
KDM5CP41229 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 TNRC18P2-201ENST00000417666 2714 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 AC008536.3-201ENST00000623282 1599 ntBASIC21.23■□□□□ 0.99
KDM5CP41229 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM5CP41229 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms