Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.48□□□□□ -0.25
RFC3P40938 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFC3P40938 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFC3P40938 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.48□□□□□ -0.25
RFC3P40938 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RFC3P40938 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RFC3P40938 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.47□□□□□ -0.25
RFC3P40938 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.47□□□□□ -0.25
RFC3P40938 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.47□□□□□ -0.25
RFC3P40938 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RFC3P40938 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.47□□□□□ -0.25
RFC3P40938 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 MIR769-201ENST00000390225 118 ntBASIC13.47□□□□□ -0.25
RFC3P40938 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.47□□□□□ -0.25
RFC3P40938 TUBB8P8-201ENST00000458717 1058 ntBASIC13.47□□□□□ -0.25
RFC3P40938 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.47□□□□□ -0.25
RFC3P40938 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.47□□□□□ -0.25
RFC3P40938 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 RHOQP1-201ENST00000555758 579 ntBASIC13.47□□□□□ -0.25
RFC3P40938 RN7SL163P-201ENST00000583100 276 ntBASIC13.47□□□□□ -0.25
RFC3P40938 AC005962.1-201ENST00000584100 773 ntBASIC13.47□□□□□ -0.25
RFC3P40938 AC132192.2-201ENST00000596206 1147 ntBASIC13.47□□□□□ -0.25
RFC3P40938 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 AP001505.2-201ENST00000616815 443 ntBASIC13.47□□□□□ -0.25
RFC3P40938 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RFC3P40938 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
RFC3P40938 AC041040.2-201ENST00000622926 2899 ntBASIC13.47□□□□□ -0.25
RFC3P40938 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.47□□□□□ -0.25
RFC3P40938 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RFC3P40938 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 MBLAC2-202ENST00000514906 1936 ntBASIC13.47□□□□□ -0.25
RFC3P40938 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.47□□□□□ -0.25
RFC3P40938 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RFC3P40938 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.47□□□□□ -0.25
RFC3P40938 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RFC3P40938 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 AGAP7P-201ENST00000582299 2062 ntBASIC13.46□□□□□ -0.25
RFC3P40938 AGAP14-201ENST00000624701 2060 ntBASIC13.46□□□□□ -0.25
RFC3P40938 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RFC3P40938 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.46□□□□□ -0.25
RFC3P40938 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RFC3P40938 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.46□□□□□ -0.25
RFC3P40938 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.46□□□□□ -0.25
RFC3P40938 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RFC3P40938 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.46□□□□□ -0.25
RFC3P40938 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RFC3P40938 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms