Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRIM23P36406 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRIM23P36406 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIM23P36406 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 PDIA3P2-201ENST00000428073 158 ntBASIC14.37□□□□□ -0.11
TRIM23P36406 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIM23P36406 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIM23P36406 RN7SL720P-201ENST00000488178 304 ntBASIC14.37□□□□□ -0.11
TRIM23P36406 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.37□□□□□ -0.11
TRIM23P36406 NUP210P1-202ENST00000504322 710 ntBASIC14.37□□□□□ -0.11
TRIM23P36406 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.37□□□□□ -0.11
TRIM23P36406 POU5F1P2-201ENST00000521750 823 ntBASIC14.37□□□□□ -0.11
TRIM23P36406 AC090857.1-201ENST00000527400 390 ntBASIC14.37□□□□□ -0.11
TRIM23P36406 AC105129.2-201ENST00000559536 390 ntBASIC14.37□□□□□ -0.11
TRIM23P36406 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIM23P36406 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIM23P36406 AF254983.2-201ENST00000612331 135 ntBASIC14.37□□□□□ -0.11
TRIM23P36406 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRIM23P36406 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM23P36406 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM23P36406 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM23P36406 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TRIM23P36406 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRIM23P36406 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM23P36406 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM23P36406 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.36□□□□□ -0.11
TRIM23P36406 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM23P36406 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM23P36406 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM23P36406 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM23P36406 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM23P36406 TPT1P11-201ENST00000458482 498 ntBASIC14.36□□□□□ -0.11
TRIM23P36406 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM23P36406 RHOQP1-201ENST00000555758 579 ntBASIC14.36□□□□□ -0.11
TRIM23P36406 AC005586.2-201ENST00000563946 837 ntBASIC14.36□□□□□ -0.11
TRIM23P36406 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM23P36406 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM23P36406 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.36□□□□□ -0.11
TRIM23P36406 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM23P36406 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.36□□□□□ -0.11
TRIM23P36406 AL353770.1-201ENST00000614915 403 ntBASIC14.36□□□□□ -0.11
TRIM23P36406 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM23P36406 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM23P36406 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM23P36406 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms