Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HMGCLP35914 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.54□□□□□ -0.08
HMGCLP35914 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HMGCLP35914 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGCLP35914 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGCLP35914 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HMGCLP35914 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HMGCLP35914 FAM90A7P-201ENST00000382628 1395 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 FAM90A23P-201ENST00000400136 1395 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGCLP35914 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGCLP35914 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HMGCLP35914 RPL18P13-201ENST00000478088 569 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.53□□□□□ -0.08
HMGCLP35914 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 HLA-J-204ENST00000495278 958 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 AC126915.1-201ENST00000522847 1038 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.53□□□□□ -0.08
HMGCLP35914 RN7SL163P-201ENST00000583100 276 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 AL008638.5-201ENST00000623814 1298 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 AC004923.1-202ENST00000642106 209 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HMGCLP35914 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.53□□□□□ -0.08
HMGCLP35914 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HMGCLP35914 AC136759.1-202ENST00000530858 2194 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 HSPA8P5-201ENST00000456928 2069 ntBASIC14.53□□□□□ -0.08
HMGCLP35914 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCLP35914 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCLP35914 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.52□□□□□ -0.08
HMGCLP35914 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
HMGCLP35914 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGCLP35914 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.52□□□□□ -0.08
HMGCLP35914 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGCLP35914 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGCLP35914 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HMGCLP35914 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCLP35914 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCLP35914 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGCLP35914 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCLP35914 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCLP35914 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCLP35914 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.52□□□□□ -0.08
HMGCLP35914 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCLP35914 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HMGCLP35914 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.52□□□□□ -0.08
HMGCLP35914 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGCLP35914 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGCLP35914 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.52□□□□□ -0.09
HMGCLP35914 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.52□□□□□ -0.09
HMGCLP35914 AC004898.1-201ENST00000451057 766 ntBASIC14.52□□□□□ -0.09
HMGCLP35914 AC104306.2-201ENST00000451877 341 ntBASIC14.52□□□□□ -0.09
HMGCLP35914 SERPINA13P-202ENST00000478994 924 ntBASIC14.52□□□□□ -0.09
HMGCLP35914 AC108725.1-201ENST00000495472 409 ntBASIC14.52□□□□□ -0.09
HMGCLP35914 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGCLP35914 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGCLP35914 AC003686.1-201ENST00000550956 1034 ntBASIC14.52□□□□□ -0.09
HMGCLP35914 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.52□□□□□ -0.09
HMGCLP35914 AC068587.8-201ENST00000641239 219 ntBASIC14.52□□□□□ -0.09
HMGCLP35914 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.52□□□□□ -0.09
HMGCLP35914 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HMGCLP35914 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.52□□□□□ -0.09
HMGCLP35914 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms